
GV SHIVASHANKAR
Principal Investigator, Mechanobiology Institute, IFOM-NUS Chair Professor, National University of Singapore
shiva.gvs@gmail.com
+65 6516 2712 ext 62712
Level 10 T-Lab
National University of Singapore
5A Engineering Drive 1
Singapore 117411
Affiliations
Head, IFOM-NUS Joint Research Laboratory, National University of Singapore
Spark-In-Science Program
Spark-in-Science is a non-profit initiative aimed at igniting scientific temper in high school and pre-university students.
In the News
- Today Online: Study to detect cancer before symptoms develop shows promise
- Straits Times: NUS research: Squeezing mature cells to become stem cells
- Channel News Asia: Becoming Human, Episode 2: Unnatural Genius
The Shivashankar Lab is hiring multiple PhD and Postdoctoral positions starting in Jan 2020. Learn more.
What is caveolar endocytosis?
What is caveolar endocytosis? Caveolar endocytosis is a clathrin-independent endocytic process which involves bulb-shaped, 50-60nm plasma membrane invaginations called caveolae (or ‘little caves’). Caveolae formation is driven by integral membrane proteins called caveolins as [...]
What is clathrin-mediated endocytosis?
What is clathrin-mediated endocytosis? Clathrin-mediated endocytosis (CME) is a vesicular transport event that facilitates the internalization and recycling of receptors engaged in a variety of processes, including signal transduction (G-protein and tyrosine kinase receptors), [...]
How does invagination and maturation of the clathrin-coated vesicle occur?
How does invagination and maturation of the clathrin-coated vesicle occur? Clathrin-coated vesicle maturation incorporates the activities of a range of proteins. Actin, myosin and WASP all have important roles in the formation and stabilization [...]
GV Shivashankar
Principal Investigator (2011-2019)
Research Areas
Nuclear mechanics, 3D chromosome organization, genome regulation, disease diagnostics
Nuclear Mechanogenomics & Cancer Diagnostics Laboratory
Shivashankar’s lab pursues research in understanding the role of cell mechanics on nuclear mechanotransduction and genome regulation.
Extra-cellular micro-environmental signals are transduced to the nucleus to regulate diverse biological processes including cellular differentiation, development and homeostasis; but the underlying mechanisms are still unclear. In this context, how such micro-environmental signals alter nuclear mechanical architecture and how it integrates with the 3D organization of chromosomes and transcription networks are rather unexplored. Using a multidisciplinary approach combining high resolution optical imaging, quantitative single-cell biology, machine learning and functional genomics, our laboratory investigates the principles underlying the coupling between nuclear mechanics and genome regulation. Our recent and ongoing work provides modular links between cellular geometry and nuclear mechanics and its impact on transcription dependent 3D organization of chromosomes and reprogramming. Such modular links define the normal state of cells and are altered during diseases. Hence our studies also have profound impact on developing single-cell nuclear biomechanical markers for early disease diagnosis and therapeutic intervention.
Biography
Shivashankar is a principal investigator at the Mechanobiology Institute, National University of Singapore. His laboratory is focused on understanding the role of cell mechanics on nuclear mechanotransduction and genome regulation in living cells using a multi-disciplinary approach. He carried out his PhD research at the Rockefeller University (1994-1999) and Postdoctoral research at NEC Research Institute, Princeton USA (1999-2000). He started his laboratory at the National Center for Biological Sciences, TIFR- Bangalore, India (2000-2009) before relocating to a tenured faculty position at the National University of Singapore in 2009. He was the Deputy Director of the Mechanobiology Institute (2011-2019). More recently he also heads a joint research laboratory with the FIRC Institute of Molecular Oncology (IFOM), Milan, Italy and was appointed as an IFOM-NUS Chair Professor in 2014. His scientific awards include the Birla Science Prize (2006), the Swarnajayanthi Fellowship (2007), and he was elected to the Indian Academy of Sciences (2010) and to the EMBO membership (2019). He will be relocating to a tenured Full Professorship at ETH Zurich jointly with the Paul Scherrer Institute, Switzerland, to start the Laboratory of Mechano-Genomics in January 2020.
Education
PhD The Rockefeller University, USA
Funding
Mechanobiology Institute, Ministry of Education Tier-3 Co-Investigator Grant & IFOM-MBI Joint Research Laboratory, Singapore.
Recent Publications
- Mitra A, Cutiongco MFA, Burla R, Zeng Y, Na Q, Kong M, Vinod B, Nai MH, Hübner B, Ludwig A, Lim CT, Shivashankar GV, Saggio I, and Zhao W. Acute chromatin decompaction stiffens the nucleus as revealed by nanopillar-induced nuclear deformation in cells. Proc Natl Acad Sci U S A 2025; 122(19):e2416659122. [PMID: 40343993]
- Das R, Sakaue T, Shivashankar GV, Prost J, and Hiraiwa T. Chromatin Remodeling Due to Transient-Link-and-Pass Activity Enhances Subnuclear Dynamics. Phys Rev Lett 2024; 132(5):058401. [PMID: 38364140]
- Jiang K, Lim SB, Xiao J, Jokhun DS, Shang M, Song X, Zhang P, Liang L, Low BC, Shivashankar GV, and Lim CT. Deleterious Mechanical Deformation Selects Mechanoresilient Cancer Cells with Enhanced Proliferation and Chemoresistance. Adv Sci (Weinh) 2023;:e2201663. [PMID: 37218524]
- Das R, Sakaue T, Shivashankar GV, Prost J, and Hiraiwa T. How enzymatic activity is involved in chromatin organization. Elife 2022; 11. [PMID: 36472500]
- Yuan L, Roy B, Ratna P, Uhler C, and Shivashankar GV. Lateral confined growth of cells activates Lef1 dependent pathways to regulate cell-state transitions. Sci Rep 2022; 12(1):17318. [PMID: 36243826]
- Venkatachalapathy S, Sreekumar D, Ratna P, and Shivashankar GV. Actomyosin contractility as a mechanical checkpoint for cell state transitions. Sci Rep 2022; 12(1):16063. [PMID: 36163393]
- Venkatachalapathy S, Jokhun DS, Andhari M, and Shivashankar GV. Single cell imaging-based chromatin biomarkers for tumor progression. Sci Rep 2021; 11(1):23041. [PMID: 34845273]
- Ghanbarzadeh Nodehi S, Shivashankar GV, Prost J, and Mohammad-Rafiee F. The characteristics of nuclear membrane fluctuations in stem cells. J R Soc Interface 2021; 18(176):20201010. [PMID: 33715401]
- Yang KD, Belyaeva A, Venkatachalapathy S, Damodaran K, Katcoff A, Radhakrishnan A, Shivashankar GV, and Uhler C. Multi-domain translation between single-cell imaging and sequencing data using autoencoders. Nat Commun 2021; 12(1):31. [PMID: 33397893]
- Lee Y, and Shivashankar GV. Analysis of transcriptional modules during human fibroblast ageing. Sci Rep 2020; 10(1):19086. [PMID: 33154459]
Lab Members
Regulating Neuron Growth
BNIP-H regulates neurotransmitter Acetylcholine
Dissecting Focal Adhesions
Reverse engineering molecular machines
Regha Kakkad
Alumni, Zaidel-Bar Group
Post-event Report: BIOS 2015, Biological Symposium by MBI WIS
Biological Symposium by the MBI Women in Science Initiative
Active Junction Formation
E-chadherin mobility regulates adhesion formation
The Mending Tissue
Cellular instructions for tissue repair
Fluid on soft, solid on stiff
Large-scale cell sensing of environmental rigidity
soSPIM Developed at MBI
Microfabrication leads to a new microscopy method
Circulating Tumor Cells
Culturing tumor cells to predict treatment outcome
Forces: Acting Far and Wide
How local forces induce distant effects on actin remodeling
Surviving Immune Attack
How does Salmonella thrive in the acidic macrophage?
Lipid Anchors Sustain Life
A role for GPI-anchored proteins in epithelium integrity














