GV ShivashankarManagement2022-03-03T16:04:09+08:00
GV SHIVASHANKAR

GV SHIVASHANKAR

Principal Investigator, Mechanobiology Institute, IFOM-NUS Chair Professor, National University of Singapore

shiva.gvs@gmail.com
+65 6516 2712 ext 62712
Level 10 T-Lab
National University of Singapore
5A Engineering Drive 1
Singapore 117411

Curriculum Vitae

Affiliations
Head, IFOM-NUS Joint Research Laboratory, National University of Singapore

Spark-In-Science Program
Spark-in-Science is a non-profit initiative aimed at igniting scientific temper in high school and pre-university students.

In the News

The Shivashankar Lab is hiring multiple PhD and Postdoctoral positions starting in Jan 2020. Learn more.

Prof Lim Chwee Teck elected Fellow of the Royal Society

MBI Principal Investigator Professor Lim Chwee Teck, Director of the Institute for Health Innovation & Technology at the National University of Singapore (NUS iHealthtech) and NUSS Professor, has been elected to the prestigious Fellowship of the Royal Society

By Andrew Wong|May 28th, 2024|Categories: News|Comments Off on Prof Lim Chwee Teck elected Fellow of the Royal Society

Congrats to Kim Whye, Boon Heng and Kosei for their accomplishments at the SCBS Annual Conference 2024!

Congratulations to Kim Whye and Boon Heng (below) for presenting their latest research on ovarian follicle development and to Kosei for being awarded the 'Best Poster Prize' at the SCBS Annual Conference 2024.

By Wen Ying Lois Faith|May 17th, 2024|Categories: Chan Lab News|Comments Off on Congrats to Kim Whye, Boon Heng and Kosei for their accomplishments at the SCBS Annual Conference 2024!

GV Shivashankar

Principal Investigator (2011-2019)

Research Areas

Nuclear mechanics, 3D chromosome organization, genome regulation, disease diagnostics

Nuclear Mechanogenomics & Cancer Diagnostics Laboratory

Shivashankar’s lab pursues research in understanding the role of cell mechanics on nuclear mechanotransduction and genome regulation.

Extra-cellular micro-environmental signals are transduced to the nucleus to regulate diverse biological processes including cellular differentiation, development and homeostasis; but the underlying mechanisms are still unclear. In this context, how such micro-environmental signals alter nuclear mechanical architecture and how it integrates with the 3D organization of chromosomes and transcription networks are rather unexplored. Using a multidisciplinary approach combining high resolution optical imaging, quantitative single-cell biology, machine learning and functional genomics, our laboratory investigates the principles underlying the coupling between nuclear mechanics and genome regulation. Our recent and ongoing work provides modular links between cellular geometry and nuclear mechanics and its impact on transcription dependent 3D organization of chromosomes and reprogramming. Such modular links define the normal state of cells and are altered during diseases. Hence our studies also have profound impact on developing single-cell nuclear biomechanical markers for early disease diagnosis and therapeutic intervention.

Biography

Shivashankar is a principal investigator at the Mechanobiology Institute, National University of Singapore. His laboratory is focused on understanding the role of cell mechanics on nuclear mechanotransduction and genome regulation in living cells using a multi-disciplinary approach. He carried out his PhD research at the Rockefeller University (1994-1999) and Postdoctoral research at NEC Research Institute, Princeton USA (1999-2000). He started his laboratory at the National Center for Biological Sciences, TIFR- Bangalore, India (2000-2009) before relocating to a tenured faculty position at the National University of Singapore in 2009. He was the Deputy Director of the Mechanobiology Institute (2011-2019). More recently he also heads a joint research laboratory with the FIRC Institute of Molecular Oncology (IFOM), Milan, Italy and was appointed as an IFOM-NUS Chair Professor in 2014. His scientific awards include the Birla Science Prize (2006), the Swarnajayanthi Fellowship (2007), and he was elected to the Indian Academy of Sciences (2010) and to the EMBO membership (2019). He will be relocating to a tenured Full Professorship at ETH Zurich jointly with the Paul Scherrer Institute, Switzerland, to start the Laboratory of Mechano-Genomics in January 2020.

Education

PhD The Rockefeller University, USA

Funding

Mechanobiology Institute, Ministry of Education Tier-3 Co-Investigator Grant & IFOM-MBI Joint Research Laboratory, Singapore.

Recent Publications

  1. Mitra A, Cutiongco MFA, Burla R, Zeng Y, Na Q, Kong M, Vinod B, Nai MH, Hübner B, Ludwig A, Lim CT, Shivashankar GV, Saggio I, and Zhao W. Acute chromatin decompaction stiffens the nucleus as revealed by nanopillar-induced nuclear deformation in cells. Proc Natl Acad Sci U S A 2025; 122(19):e2416659122. [PMID: 40343993]
  2. Das R, Sakaue T, Shivashankar GV, Prost J, and Hiraiwa T. Chromatin Remodeling Due to Transient-Link-and-Pass Activity Enhances Subnuclear Dynamics. Phys Rev Lett 2024; 132(5):058401. [PMID: 38364140]
  3. Jiang K, Lim SB, Xiao J, Jokhun DS, Shang M, Song X, Zhang P, Liang L, Low BC, Shivashankar GV, and Lim CT. Deleterious Mechanical Deformation Selects Mechanoresilient Cancer Cells with Enhanced Proliferation and Chemoresistance. Adv Sci (Weinh) 2023;:e2201663. [PMID: 37218524]
  4. Das R, Sakaue T, Shivashankar GV, Prost J, and Hiraiwa T. How enzymatic activity is involved in chromatin organization. Elife 2022; 11. [PMID: 36472500]
  5. Yuan L, Roy B, Ratna P, Uhler C, and Shivashankar GV. Lateral confined growth of cells activates Lef1 dependent pathways to regulate cell-state transitions. Sci Rep 2022; 12(1):17318. [PMID: 36243826]
  6. Venkatachalapathy S, Sreekumar D, Ratna P, and Shivashankar GV. Actomyosin contractility as a mechanical checkpoint for cell state transitions. Sci Rep 2022; 12(1):16063. [PMID: 36163393]
  7. Venkatachalapathy S, Jokhun DS, Andhari M, and Shivashankar GV. Single cell imaging-based chromatin biomarkers for tumor progression. Sci Rep 2021; 11(1):23041. [PMID: 34845273]
  8. Ghanbarzadeh Nodehi S, Shivashankar GV, Prost J, and Mohammad-Rafiee F. The characteristics of nuclear membrane fluctuations in stem cells. J R Soc Interface 2021; 18(176):20201010. [PMID: 33715401]
  9. Yang KD, Belyaeva A, Venkatachalapathy S, Damodaran K, Katcoff A, Radhakrishnan A, Shivashankar GV, and Uhler C. Multi-domain translation between single-cell imaging and sequencing data using autoencoders. Nat Commun 2021; 12(1):31. [PMID: 33397893]
  10. Lee Y, and Shivashankar GV. Analysis of transcriptional modules during human fibroblast ageing. Sci Rep 2020; 10(1):19086. [PMID: 33154459]

Lab Members

Lan Xi

Nov 2nd, 2022|Comments Off on Lan Xi

PhD Student, Class of August 2022, Li Group

Li Hangfeng

Nov 2nd, 2022|Comments Off on Li Hangfeng

PhD Student, Class of August 2022, Kanchanawong Group

Lin Yueying

Nov 2nd, 2022|Comments Off on Lin Yueying

PhD Student, Class of August 2022, Yan Jie Group

Srinivas Sheshagiri Prabhu

Nov 2nd, 2022|Comments Off on Srinivas Sheshagiri Prabhu

PhD student, Class of August 2022, Low Group, Bershadsky Group

Lim Yuan Bin

Nov 2nd, 2022|Comments Off on Lim Yuan Bin

PhD Student, Class of August 2022, Toyama Group, Holle Group

Shinny Sunny

Nov 2nd, 2022|Comments Off on Shinny Sunny

PhD Student, Class of August 2022, Holle Group

Ankita Nitin Nayak

Nov 2nd, 2022|Comments Off on Ankita Nitin Nayak

PhD Student, Class of August 2022, Hirashima Group

Esra Karatas

Oct 17th, 2022|Comments Off on Esra Karatas

Research Fellow, Beghin Group

Jyothsna Vasudevan

Oct 17th, 2022|Comments Off on Jyothsna Vasudevan

Research Fellow, Pavesi Group

Liu Shiying

Oct 17th, 2022|Comments Off on Liu Shiying

Research Fellow, Kanchanawong Group

Sound Wai Phow @ Lin Wei Hao

Oct 17th, 2022|Comments Off on Sound Wai Phow @ Lin Wei Hao

Research Assistant, Hirashima Group

Ng Wenfa

Oct 14th, 2022|Comments Off on Ng Wenfa

Research Assistant, Lim Group

About the National University of Singapore

About NUSA leading global university centred in Asia, NUS is Singapore's flagship university, offering a global approach to education and research with a focus on Asian perspectives and expertise.

About the Mechanobiology Institute, National University of Singapore

About MBIOne of four Research Centres of Excellence at NUS, MBI is working to identify, measure and describe how the forces for motility and morphogenesis are expressed at the molecular, cellular and tissue level.
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